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biac:basics [2012/06/15 14:35]
mm265
biac:basics [2019/02/11 21:28] (current)
cmp12
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 === Network === === Network ===
  
-  * Cluster wiki: http://wiki.biac.duke.edu/biac:cluster +  * Cluster wiki: http://wiki.biac.duke.edu/biac:cluster 
-  * Hugin for dummies +
-                   …or really smart people that just have never worked in this type of system +
-                   The BIAC cluster, Hugin, is a Linux base processor for analyzing any type of data.  You will work on Hugin though a terminal window by writing commands one line at a time.  In order to set up access to Hugin on your computer, you need to be behind the firewall.  Being at BIAC or on "Diamonds" or "Clubs" puts you behind this firewall.  First, you will need X-Win.  On BIAC computers, X-Win comes standard but it can also be downloaded through OIT’s website here http://oit.duke.edu/comp-print/software/index.php (select “Browse and order software”).  You will also need a cluster account. Please send an email to help@biac.duke.edu requesting a cluster account.  Include your BIAC Windows username in the email (see http://wiki.biac.duke.edu/biac:accounts). +
- +
-On an interactive node +
-Cd findexp +
- +
- +
-Command lines +
-ls +
-ls -ltr +
-mkdir +
-cd +
-.. +
-Tab to complete +
-Gedit . nedit +
- Commenting out +
- saving +
-+
-bash +
-rm +
-Up arrow +
-cp +
-qdel +
-qstatall +
-Blue “directories” are equivalent to folders, “cd”ing is like double clicking +
-Getting files from munin onto hugin, and mounting experiments?  Findexp +
-Print from terminal window +
- +
- +
   * Remote desktopping: http://wiki.biac.duke.edu/biac:remotessh   * Remote desktopping: http://wiki.biac.duke.edu/biac:remotessh
  
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   * Requesting more memory: see "job restrictions" http://wiki.biac.duke.edu/biac:cluster:interactive   * Requesting more memory: see "job restrictions" http://wiki.biac.duke.edu/biac:cluster:interactive
   * Show Series: http://wiki.biac.duke.edu/biac:matlab:showsrs2   * Show Series: http://wiki.biac.duke.edu/biac:matlab:showsrs2
-  * Trouble shooting flow chart +  * Trouble shooting flow chart: {{:biac:troubleshooting.pdf|}} 
-  * Useful tools prezi+  * Useful tools Prezi: http://prezi.com/pqtfgthwlqqw/useful-tools-in-neuroimaging/
biac/basics.1339770943.txt.gz · Last modified: 2014/08/04 16:03 (external edit)