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biac:cluster:architecture [2022/06/01 19:07] 127.0.0.1 external edit |
biac:cluster:architecture [2022/06/06 17:44] cmp12 |
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The illustration below gives a good overview of how BIAC software interacts with SGE during job submission: | The illustration below gives a good overview of how BIAC software interacts with SGE during job submission: | ||
- | {{ : | + | {{ : |
- User logs in to the head node via ssh\\ | - User logs in to the head node via ssh\\ | ||
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- User submits a job through qsub -v EXPERIMENT=Usertest.01\\ | - User submits a job through qsub -v EXPERIMENT=Usertest.01\\ | ||
- findexp returns an experiment path .. it can be saved to the $EXPERIMENT variable if following is present in the submission script: | - findexp returns an experiment path .. it can be saved to the $EXPERIMENT variable if following is present in the submission script: | ||
- | < | + | |
- any access to experiment paths returned through findexp are picked up by the BIAC Proxy mounter. | - any access to experiment paths returned through findexp are picked up by the BIAC Proxy mounter. |