biac:cluster:packages
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Installed Packages
OS: Scientific Linux release 7.4 (Nitrogen) : updated 08/21/18
- bxh_xcede_tools: v1.11.13
- Freesurfer: v6.0.1, v6.0.0, v5.3.0, (see this post to change version)
- libsvm: v2.9
- liblinear: v1.51
- afni: openmp_64 ( AFNI_17.0.01 )
- Dicom Toolkit: v3.6.1
- MedINRIA: v2.2.3
- ANTS: v2.3.1, v2.2.0
- Slicer4: v4.6.4
- DTIPrep: v1.2.4
- DTK: v0.6.4.1
- TrackVis: v0.6.1
- Connectome Mapping Toolkit: v1.2.0
- Weka: v3.8.1
- MRTrix3: v3.0_RC2
- ITK-SNAP: v3.2.0
- R: v3.4.4
- MATLAB : R2014a, R2017a, R2018a
- Python : 2.7, 3.6
- Singularity : 2.5.2
- HCP Pipelines : 3.4.0
Matlab 2017a | SPM8 Toolboxes |
---|---|
BIAC Tools | ArtRepair |
spm8 | DARTEL |
NIFTI Libraries | Diffusion TB |
fslroi | Marsbar |
libsvm-3.0 | vbm8 |
WFU_PickAtlas_3.0.1 | Volumes TB |
Art | LST |
Spider | DRIFTER |
GIFT | CONN |
Pls |
python3.6 | python2.7 |
---|---|
apipkg==1.5 | amico==1.0 |
atomicwrites==1.1.5 | apptools==4.4.0 |
attrs==18.1.0 | argh==0.26.2 |
backcall==0.1.0 | asn1crypto==0.22.0 |
certifi==2018.8.13 | backports-abc==0.5 |
chardet==3.0.4 | backports.functools-lru-cache==1.5 |
citeproc-py==0.4.0 | backports.shutil-get-terminal-size==1.0.0 |
click==6.7 | backports.ssl-match-hostname==3.4.0.2 |
cloudpickle==0.5.3 | backports.weakref==1.0.post1 |
configparser==3.5.0 | bleach==1.5.0 |
cycler==0.10.0 | bxh==0.9 |
dask==0.18.2 | certifi==2017.4.17 |
decorator==4.3.0 | cffi==1.10.0 |
dipy==0.14.0 | cfflib==2.0.5 |
duecredit==0.6.4 | chardet==2.2.1 |
execnet==1.5.0 | click==6.7 |
fmriprep==1.1.4 | configobj==4.7.2 |
funcsigs==1.0.2 | configparser==3.5.0 |
future==0.16.0 | Connectome-Mapper==1.2.0 |
grabbit==0.2.2 | cryptography==1.9 |
h5py==2.8.0 | cycler==0.10.0 |
idna==2.7 | decorator==3.4.0 |
indexed-gzip==0.8.7 | dipy==0.11.0 |
ipython==6.5.0 | docutils==0.13.1 |
ipython-genutils==0.2.0 | empy==3.3.2 |
isodate==0.6.0 | entrypoints==0.2.3 |
jedi==0.12.1 | enum34==1.1.6 |
Jinja2==2.10 | ez-setup==0.9 |
kiwisolver==1.0.1 | funcsigs==1.0.2 |
lockfile==0.12.2 | functools32==3.2.3.post2 |
lxml==4.2.4 | future==0.16.0 |
MarkupSafe==1.0 | futures==3.2.0 |
matplotlib==2.2.3 | grabbit==0.1.1 |
mock==2.0.0 | html5lib==0.9999999 |
more-itertools==4.3.0 | idna==2.5 |
mpmath==1.0.0 | indexed-gzip==0.8.6 |
mriqc==0.13.1 | iniparse==0.4 |
networkx==2.1 | ipaddress==1.0.18 |
nibabel==2.3.0 | IPy==0.75 |
nilearn==0.4.2 | ipykernel==4.6.1 |
nipy==0.4.2 | ipython==5.4.1 |
nipype==1.1.2 | ipython-genutils==0.2.0 |
nitime==0.7 | ipywidgets==6.0.0 |
niworkflows==0.4.2 | isodate==0.5.4 |
num2words==0.5.7 | javapackages==1.0.0 |
numpy==1.15.0 | Jinja2==2.9.6 |
packaging==17.1 | jsonschema==2.6.0 |
pandas==0.23.4 | jupyter==1.0.0 |
parso==0.3.1 | jupyter-client==5.0.1 |
patsy==0.5.0 | jupyter-console==5.1.0 |
pbr==4.2.0 | jupyter-core==4.3.0 |
pexpect==4.6.0 | Keras==2.1.2 |
pickleshare==0.7.4 | kitchen==1.1.1 |
Pillow==5.2.0 | kiwisolver==1.0.1 |
pluggy==0.7.1 | Lasagne==0.1 |
prompt-toolkit==1.0.15 | line-profiler==2.1.2 |
prov==1.5.0 | lockfile==0.12.2 |
ptyprocess==0.6.0 | lxml==3.2.1 |
py==1.5.4 | Markdown==2.6.10 |
pybids==0.6.4 | MarkupSafe==1.0 |
pydot==1.2.4 | matplotlib==2.2.2 |
pydotplus==2.0.2 | mistune==0.7.4 |
Pygments==2.2.0 | mock==2.0.0 |
pyparsing==2.2.0 | mpmath==0.19 |
pytest==3.7.1 | nbconvert==5.2.1 |
pytest-forked==0.2 | nbformat==4.3.0 |
pytest-xdist==1.22.5 | netifaces==0.10.4 |
python-dateutil==2.7.3 | networkx==1.11 |
pytz==2018.5 | nibabel==2.3.0 |
PyWavelets==0.5.2 | nilearn==0.3.0 |
PyYAML==3.13 | nipy==0.4.1 |
rdflib==4.2.2 | nipype==1.1.0 |
requests==2.19.1 | nitime==0.7 |
scikit-image==0.14.0 | niworkflows==0.4.2 |
scikit-learn==0.19.2 | nose==1.3.7 |
scipy==1.3.0 | notebook==5.0.0 |
seaborn==0.9.0 | num2words==0.5.6 |
simplegeneric==0.8.1 | numpy==1.14.5 |
simplejson==3.16.0 | olefile==0.44 |
six==1.11.0 | packaging==16.8 |
sklearn==0.0 | pandas==0.20.2 |
statsmodels==0.9.0 | pandocfilters==1.4.1 |
svgutils==0.3.0 | paramiko==2.1.2 |
sympy==1.2 | pathlib2==2.2.1 |
toolz==0.9.0 | pathtools==0.1.2 |
traitlets==4.3.2 | patsy==0.4.1 |
traits==4.6.0 | pbr==3.1.1 |
urllib3==1.23 | perf==0.1 |
versioneer==0.18 | pexpect==4.2.1 |
wcwidth==0.1.7 | pickleshare==0.7.4 |
xvfbwrapper==0.2.9 | Pillow==4.1.1 |
virtualenv==16.0.0 | policycoreutils-default-encoding==0.1 |
prompt-toolkit==1.0.14 | |
protobuf==3.5.1 | |
prov==1.5.0 | |
psycopg2==2.7.1 | |
ptyprocess==0.5.1 | |
py==1.4.34 | |
pyasn1==0.2.3 | |
pybids==0.5.1 | |
pycparser==2.17 | |
pycrypto==2.6.1 | |
pycurl==7.19.0 | |
pydeface==1.0 | |
pydicom==0.9.9 | |
pydot==1.2.3 | |
pydotplus==2.0.2 | |
pyface==5.1.0 | |
PyFFTW3==0.2.1 | |
Pygments==2.2.0 | |
pygobject==3.22.0 | |
pygpgme==0.3 | |
pyliblzma==0.5.3 | |
pymer4==0.0.1 | |
pymvpa2==2.6.1 | |
pyparsing==2.2.0 | |
pytest==3.1.2 | |
python-daemon==2.1.2 | |
python-dateutil==2.6.0 | |
python-linux-procfs==0.4.9 | |
pytz==2017.2 | |
pyudev==0.15 | |
PyWavelets==0.5.2 | |
pyxattr==0.5.1 | |
PyYAML==3.12 | |
pyzmq==16.0.2 | |
qtconsole==4.3.0 | |
rdflib==4.2.2 | |
rpy2==2.8.6 | |
scandir==1.5 | |
schedutils==0.4 | |
scikit-image==0.13.0 | |
scikit-learn==0.19.1 | |
scikit-neuralnetwork==0.7 | |
scikits.statsmodels==0.3.1 | |
scipy==1.3.0 | |
seaborn==0.7.1 | |
seobject==0.1 | |
sepolicy==1.1 | |
simplegeneric==0.8.1 | |
simplejson==3.10.0 | |
singledispatch==3.4.0.3 | |
six==1.11.0 | |
sklearn==0.0 | |
slip==0.4.0 | |
slip.dbus==0.4.0 | |
spams==2.6 | |
SSSDConfig==1.15.2 | |
statsmodels==0.8.0 | |
subprocess32==3.2.7 | |
svgutils==0.3.0 | |
sympy==1.0 | |
tensorflow==1.4.1 | |
tensorflow-tensorboard==0.4.0rc3 | |
terminado==0.6 | |
testpath==0.3.1 | |
Theano==0.9.0 | |
tinycss==0.4 | |
tornado==4.5.1 | |
traitlets==4.3.2 | |
traits==4.6.0 | |
traitsui==5.1.0 | |
urlgrabber==3.10 | |
versioneer==0.18 | |
virtualenv==15.1.0 | |
watchdog==0.8.3 | |
wcwidth==0.1.7 | |
webencodings==0.5.1 | |
Werkzeug==0.14.1 | |
widgetsnbextension==2.0.0 | |
wxPython==2.8.12.0 | |
wxPython-common==2.8.12.0 | |
xmltodict==0.11.0 | |
xvfbwrapper==0.2.9 | |
yum-metadata-parser==1.1.4 |
biac/cluster/packages.1560539391.txt.gz · Last modified: 2024/06/21 15:41 (external edit)