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biac:cluster [2019/02/07 20:16] cmp12 |
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===== User guides ===== | ===== User guides ===== | ||
- | * [[biac: | + | * [[biac: |
- | * [[biac: | + | * [[biac: |
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- | * [[biac: | + | * [[biac: |
- | * [[biac: | + | * [[biac: |
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* [[huettel: | * [[huettel: | ||
- | === Hugin for dummies... or really smart people who aren't used to this system yet! === | + | === Basic Primer |
- | The BIAC cluster, Hugin, | + | The BIAC cluster is a Linux-based processor put in place to analyze any type of data. You will work on the cluster |
- | To connect to the cluster, you will need [[https:// | + | To connect to the cluster, you will need XWin/Putty from windows, or Terminal with Xquartz |
- | + | * [[biac:cluster:access | Accessing | |
- | == Connecting to Hugin == | + | |
- | * Begin by running X-Config in the X-Win32 folder under All Programs on your Start Menu | + | |
- | * Select your cluster | + | |
- | * Alternative: | + | |
- | * Under the X-Win32 tab in your programs select X-Win32 2014 (or whatever year) | + | |
- | * The X-Win32 icon will appear next to the time and date in the bottom right hand corner of your screen | + | |
- | * Right click it then scroll down to “My Connections” | + | |
- | * Select your profile by clicking “Hugin” | + | |
- | * If, prompted, enter your cluster | + | |
- | * Your command line should appear with username@hugin (this is your home directory on the cluster) in a terminal window | + | |
- | * Now you are “on the cluster,” aka Hugin | + | |
- | | + | |
== The Interactive Node == | == The Interactive Node == | ||
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* List of packages: http:// | * List of packages: http:// | ||
- | * Getting on: log onto Hugin, in the command line (username@hugin: ___) type “qinteract” if prompted, type yes, and then enter your cluster password. | + | * Getting on: log onto the cluster, in the command line (username@cluster: ___) type “qinteract” if prompted, type yes, and then enter your cluster password. |
* Congratulations! | * Congratulations! | ||
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== EXTRA TIPS == | == EXTRA TIPS == | ||
- | | + | * If you command line is gone in the cluster, as in you don’t have the prompt to type something, make sure nothing is open in gedit (for example batchMakeFSL_Data is open using gedit – click out), click ctrl+c |
- | | + | |
* In order to avoid this, follow commands with an & | * In order to avoid this, follow commands with an & | ||
* Hit the up arrow in order to go to the previous written command | * Hit the up arrow in order to go to the previous written command | ||
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===== Administration guides ===== | ===== Administration guides ===== | ||
- | * [[biac: | ||
* < | * < | ||
* [[biac: | * [[biac: |