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--- biac:fsl [2013/01/04 20:58]
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-=====FSL=====
-FSL is the fMRI Software Library analysis package developed by the FMRIB laboratory at Oxford University. Useful FMRIB links are:
-  * [[http://www.fmrib.ox.ac.uk/fsl|FSL]] - The FMRIB software homepage.
-  * [[http://www.fmrib.ox.ac.uk/fslcourse|FSL Tutorial]] - The FMRIB course tutorial.
-====FSL Workshop Material (12/9/2008)====
-FSL Overview: Rich Yaxley & O'Dhaniel Mullette-Gillman
-  * {{:biac:fsl_preprocessing.pdf|fsl_preprocessing.pdf}}
-Experimental Design: McKell Carter & Amy Winecoff
-  * {{:biac:notes_for_fsl_workshop.doc|notes_for_fsl_workshop.doc}}
-Advanced Experimental Design: David Smith & John Clithero
-  * {{:biac:fsl_workshop_advanced_design.pdf|fsl_workshop_advanced_design.pdf}}
-  * [[http://www.fmrib.ox.ac.uk/fsl/feat5/output.html]]
-Scripting: Chris Petty & Justin Meyer
-  * [[:biac:fsl:guide#iii_writing_a_batch_script_for_fsl|Writing a Batch Script]]
-====BIAC FSL Guide====
-Step-by-step instructions for using FSL at BIAC can be found at:
-  * [[biac:fsl:guide|FSL Guide]]
-A sample FSL analysis; requres access to the Class.01 directory.
-  * [[biac:fsl:Class_Example|FSL Class Example: First Level]]
-  * [[biac:fsl:Class_SecondLevel|FSL Class Example: Second Level]]
-----
-==== BIAC 2012/2013 Course Guide ====
-by Zoe Englander //
-{{:biac:fslcourse.pdf| FSL 2013 }}
-{{:biac:command_line_demo.pdf| Command Line demo}}

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