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biac:fsl [2011/03/31 14:49]
127.0.0.1 external edit
biac:fsl [2014/08/04 16:03] (current)
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   * [[http://​www.fmrib.ox.ac.uk/​fslcourse|FSL Tutorial]] - The FMRIB course tutorial.   * [[http://​www.fmrib.ox.ac.uk/​fslcourse|FSL Tutorial]] - The FMRIB course tutorial.
  
 +To change your FSL version:
  
 +<​code>​
 +export FSLDIR=/​usr/​local/​packages/​fsl-5.0.1
 +. ${FSLDIR}/​etc/​fslconf/​fsl.sh
 +
 +Then call the tools with the fullpath:
 +${FSLDIR}/​bin/​fsl
 +</​code>​
 ====FSL Workshop Material (12/​9/​2008)==== ====FSL Workshop Material (12/​9/​2008)====
 FSL Overview: Rich Yaxley & O'​Dhaniel Mullette-Gillman FSL Overview: Rich Yaxley & O'​Dhaniel Mullette-Gillman
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 Scripting: Chris Petty & Justin Meyer Scripting: Chris Petty & Justin Meyer
-  * [[:​biac:​fsl:​guide#​batching]] +  * [[:​biac:​fsl:​guide#​iii_writing_a_batch_script_for_fsl|Writing a Batch Script]]
-  * [[:​biac:​fsl:​guide#​writing_a_batch_script_for_fsl]] +
  
 ====BIAC FSL Guide==== ====BIAC FSL Guide====
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   * [[biac:​fsl:​Class_Example|FSL Class Example: First Level]]   * [[biac:​fsl:​Class_Example|FSL Class Example: First Level]]
   * [[biac:​fsl:​Class_SecondLevel|FSL Class Example: Second Level]]   * [[biac:​fsl:​Class_SecondLevel|FSL Class Example: Second Level]]
 +
 +
 +
 +----
 +
 +==== BIAC 2012/2013 Course Guide ====
 +by Zoe Englander
 +
 +{{:​biac:​fslcourse.pdf| FSL 2013 }}
 +{{:​biac:​command_line_demo.pdf| Command Line demo}}
 +{{:​biac:​roianalysis.ppt| ROI Analysis Tutorial}} ​
biac/fsl.1301582952.txt.gz · Last modified: 2014/08/04 16:03 (external edit)