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--- biac:fsl [2012/12/12 18:03]
petty [FSL Workshop Material (12/9/2008)]
+++ biac:fsl [2023/02/23 18:43] (current)
@@ Line 5: / Line 5: @@
   * [[http://www.fmrib.ox.ac.uk/fslcourse|FSL Tutorial]] - The FMRIB course tutorial.
+To change your FSL version:
+<code>
+export FSLDIR=/usr/local/packages/fsl-5.0.1
+. ${FSLDIR}/etc/fslconf/fsl.sh
+Then call the tools with the fullpath:
+${FSLDIR}/bin/fsl
+</code>
 ====FSL Workshop Material (12/9/2008)====
 FSL Overview: Rich Yaxley & O'Dhaniel Mullette-Gillman
@@ Line 18: / Line 26: @@
 Scripting: Chris Petty & Justin Meyer
-  * [[:biac:fsl:guide#batching]]
+  * [[:biac:fsl:guide#iii_writing_a_batch_script_for_fsl|Writing a Batch Script]]
-  * [[:biac:fsl:guide#iii_writing_a_batch_script_for_fsl]]
 ====BIAC FSL Guide====
@@ Line 28: / Line 35: @@
   * [[biac:fsl:Class_Example|FSL Class Example: First Level]]
   * [[biac:fsl:Class_SecondLevel|FSL Class Example: Second Level]]
+----
+==== BIAC 2012/2013 Course Guide ====
+by Zoe Englander
+{{:biac:fslcourse.pdf| FSL 2013 }}
+{{:biac:command_line_demo.pdf| Command Line demo}}
+{{:biac:roianalysis.ppt| ROI Analysis Tutorial}}

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