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biac:gettingstarted [2017/09/20 13:59] – [People] ane5biac:gettingstarted [2023/10/25 21:05] – Added in User Access Instructions and Access FAQs jel76
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 =====  Getting started ===== =====  Getting started =====
 Welcome to the BIAC Wiki!  This page will help you get started at BIAC and introduce you to the various systems for data analysis and otherwise.  You can also bookmark this page to use as a resource for common reference. Welcome to the BIAC Wiki!  This page will help you get started at BIAC and introduce you to the various systems for data analysis and otherwise.  You can also bookmark this page to use as a resource for common reference.
 +
 +====BIAC User Access====
 +
 +===BIAC User Access Instructions===
 +
 +1) Email [[biac-newuser@duke.edu]] with your general access request and include:
 +  * Email 
 +  * NetID
 +
 +2) BIAC will then create your record in REDCap 
 +  * If you need Level 1 Access, a New User Orientation will also be set up at this time
 +
 +3) Once your record is created an email will be sent from [[biac-newuser@duke.edu]] to the one you previously provided
 +  * Click on “BIAC User Profile” or the link to begin the survey
 +
 +4) Login into the survey using your NetID and email and complete the survey
 +
 +5) If you requested Level 1 Access, an additional email will be sent titled, “Level 1 Access Survey”  __**DO NOT begin this survey until you have:**__
 +  * Scheduled a New User Orientation
 +  * Completed the MRI Safety Quiz
 +  * Completed the MRI Level 1 Access Signature Sheet 
 +  * Completed the MRI Subject Screening form 
 +
 +**The safety tutorials, safety quiz and both documents can be found here: [[https://www.biac.duke.edu/research/safety]]** 
 +
 +6) Upload both documents, the date you completed the MRI Safety quiz, and the date of your New User Orientation session in the Level 1 Access survey
 +  * The Login in this survey is the also your NetID and email 
 +
 +7) Once you have completed the “BIAC User Profile” survey, the “Level 1 Required Training and Documents” survey (only if need Level 1 access), and completed the New User Orientation – your sponsor will be contacted to confirm your access request 
 +
 +8) Once your sponsor confirms your request, access will then be provided
 + 
 +===BIAC User Access FAQs===
 +Q: What is Level 1 Access? Do I need it? 
 +  * A:This access is for those who plan to bring participants to the scanner suites and/or use the test rooms. For Level 1 Access you will to complete the New User Orientation, the MRI Safety quiz, the MRI Subject Screening Form, and the MRI Level 1 Access Signature Sheet. 
 +
 +Q: How do I schedule a New User Orientation?
 +  * A: Email biac-newuser@duke.edu and request a New User Orientation session. All sessions are currently taught over Zoom for approximately, 1.5 hours.  
 +
 +Q: I only need access to an experiment’s data; do I need to complete a New User Orientation session? 
 +  * A: No. New User Orientation are for those requesting access to the scanner suites/test rooms and plan to work with participants. If you only need data access, please email biac-newuser@duke.edu with your access request, NetID, and email.
 +
 +Q: I already have data access but need to get scheduling access, who do I email? 
 +  * A: Email biac-help@duke.edu with your access request with your sponsor CCed so your request can be confirmed. 
 +
 +Q: Can I access the REDCap surveys from anywhere or do I have to be on the Duke network? 
 +  * A: The BIAC User Profile survey and the Level 1 Access survey through REDCap can be taken anywhere. You will just need to login into the quiz using the NetID and email you previously provided
 +
 +Q: I now have access to the BIAC Scanner Schedule, but I cannot login to view it…
 +  * A: Make sure you are on the DHE network or on a DHE computer. If you are working remotely, you may need to request DHE access. 
  
 ==== BIAC administrative access ==== ==== BIAC administrative access ====
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 ==Servers== ==Servers==
-Hot off the scanner, your data will travel to purchased space on a server, such as "Munin" or "Fatt."  Your data basically lives here, but is analyzed on the cluster, "Hugin. For more information on the scanner to server process, visit http://wiki.biac.duke.edu/biac:pipeline+Hot off the scanner, your data will travel to purchased space on a server, such as "Munin" or "Fatt."  Your data basically lives here, but is analyzed on the cluster.  For more information on the scanner to server process, visit http://wiki.biac.duke.edu/biac:pipeline
  
 On the server, each study has a respective study folder (see example).  In order to access this folder you must "map the drive."  Do this by selecting the "My computer" icon on your desktop, then the "map drive" icon at the top of that window.  Any drive (letter) can be chosen, then for the folder type the server, for example Munin, then the path, for example \\Munin\data\fbirn.  Check the "reconnect at logon" box and hit "finish." On the server, each study has a respective study folder (see example).  In order to access this folder you must "map the drive."  Do this by selecting the "My computer" icon on your desktop, then the "map drive" icon at the top of that window.  Any drive (letter) can be chosen, then for the folder type the server, for example Munin, then the path, for example \\Munin\data\fbirn.  Check the "reconnect at logon" box and hit "finish."
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 ==The Cluster== ==The Cluster==
-Once you get a cluster account, you can set up access like so... http://wiki.biac.duke.edu/suppl/intro.htm (replace "einstein" with "hugin")+Once you get a cluster account, you can set up access like so... http://wiki.biac.duke.edu/suppl/intro.htm (replace "einstein" with "cluster")
  
 You analyze your data by "submitting jobs," on the cluster, see http://wiki.biac.duke.edu/biac:cluster:submit#job_submission You analyze your data by "submitting jobs," on the cluster, see http://wiki.biac.duke.edu/biac:cluster:submit#job_submission
 ==== People ==== ==== People ====
-BIAC website: http://www.biac.duke.edu/people/subsection.asp?subsection=Everyone+BIAC website:  
 +http://www.biac.duke.edu/people/subsection.asp?subsection=Everyone
  
-affiliates:+Affiliates:
 CCN - http://www.mind.duke.edu/ CCN - http://www.mind.duke.edu/
 DIBS - http://dibs.duke.edu/ DIBS - http://dibs.duke.edu/
 ==== Other Intros ==== ==== Other Intros ====
  
-On-line Prezi link:  http://prezi.com/log2tqcmbma6/welcome-to-biac/ +On-line Pre 
 +zi link:  http://prezi.com/log2tqcmbma6/welcome-to-biac/ 
  
-Useful set-up instructions for Munin, Hugin, and qinteract: {{:biac:infrequent_setup.doc|}}+Useful set-up instructions for Munin, the cluster, and qinteract: {{:biac:infrequent_setup.doc|}}
  
  
 {{section>[biac:analysis]#useful_guides}} {{section>[biac:analysis]#useful_guides}}
biac/gettingstarted.txt · Last modified: 2024/06/21 15:44 by 127.0.0.1