Both sides previous revisionPrevious revisionNext revision | Previous revisionNext revisionBoth sides next revision |
biac:analysis [2013/10/01 19:12] – cmp12_sa | biac:analysis [2017/09/29 19:10] – [Structural Connectome Method] cwt9 |
---|
===== Image Analysis software ===== | ===== BIAC Image Analysis software ===== |
* [[biac:pipeline|Processing Pipeline]] - Automated MRI data transfer and preprocessing software. | * [[biac:pipeline|Processing Pipeline]] - Automated MRI data transfer and preprocessing software. |
* [[biac:xmlheader|BXH/XCEDE tools]] - Series of tools for describing imaging data (including ''bxh_eventstats'') | * [[biac:xmlheader|BXH/XCEDE tools]] - Series of tools for describing imaging data (including ''bxh_eventstats'') |
* [[biac:freesurfer|FreeSurfer]] - Cortical surface reconstruction software from Harvard University | * [[biac:freesurfer|FreeSurfer]] - Cortical surface reconstruction software from Harvard University |
* [[biac:fsl|FSL]] - Statistical analysis software from Oxford University | * [[biac:fsl|FSL]] - Statistical analysis software from Oxford University |
| * [[biac:dtiprep|DTIPrep]] - DTI QA and preprocessing software from NRRD |
| * [[biac:dtk|DTK]] - Diffusion ToolKit for DTI analysis from Harvard |
| * [[biac:medinria|MEDInria]] - DTI analysis from France |
| |
===== Other Analysis software ===== | ===== Other Analysis software ===== |
* [[biac:analysis:resting_pipeline|Python/FSL Resting State Pipeline]] Documentation of the BIAC resting state pipeline | * [[biac:analysis:resting_pipeline|Python/FSL Resting State Pipeline]] Documentation of the BIAC resting state pipeline |
* [[biac:analysis:physiological|Physiological Correction Methods]] Documentation of some local correction methods | * [[biac:analysis:physiological|Physiological Correction Methods]] Documentation of some local correction methods |
| |
| ====Structural Connectome Methods==== |
| * [[biac:analysis:structural_connectome|Structural Connectome Pipeline]] Documentation of standard BIAC structural connectome methodology |
| |
===== Useful Guides ===== | ===== Useful Guides ===== |