biac:cluster
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biac:cluster [2016/05/24 17:43] – [Tutorials] favorini | biac:cluster [2023/03/29 20:06] – cmp12 | ||
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===== User guides ===== | ===== User guides ===== | ||
- | * [[biac: | + | |
- | * [[biac: | + | |
- | * [[biac: | + | * [[biac: |
- | * [[biac: | + | * [[biac: |
- | * [[biac: | + | * [[biac: |
- | * [[biac: | + | * [[biac: |
- | * [[biac: | + | * [[biac: |
+ | * [[biac: | ||
* [[huettel: | * [[huettel: | ||
- | ===== Tutorials ===== | + | === Basic Primer |
- | A [[http:// | + | The BIAC cluster is a Linux-based processor put in place to analyze any type of data. You will work on the cluster though a terminal window by writing commands one line at a time. In order to set up access to the cluster on your computer, you need to be behind the DHE firewall. |
+ | |||
+ | To connect | ||
+ | * [[biac: | ||
- | Or see {{: | ||
- | |||
- | === Hugin for dummies ...or really smart people who aren't used to this system yet! === | ||
- | |||
- | The BIAC cluster, Hugin, is a Linux-based processor put in place to analyze any type of data. You will work on Hugin though a terminal window by writing commands one line at a time. In order to set up access to Hugin on your computer, you need to be behind the DHE firewall. | ||
- | |||
- | To connect to the cluster, you will need X-Windows software. On BIAC computers X-Win32 comes standard, but it can also be downloaded from [[http:// | ||
- | |||
- | == Opening Hugin == | ||
- | * Begin by running X-Win Config under the X-Win tab in your programs | ||
- | * Select your cluster profile, aptly named “Hugin, | ||
- | * Alternative: | ||
- | * Under the X-Win tab in your programs select X-Win32 2012 (or whatever year) | ||
- | * The X-Win icon will appear next to the time and date in the bottom right hand corner of your screen | ||
- | * Right click it then scroll down to “My Connections” | ||
- | * Select your profile by clicking “Hugin” | ||
- | * If, prompted, enter your cluster password and hit enter (your cluster password may be different from your BIAC password) | ||
- | * Your command line should appear with username@hugin (this is your home directory on the cluster) in a terminal window | ||
- | * Now you are “on the cluster,” aka Hugin | ||
- | |||
- | == the Interactive Node == | + | == The Interactive Node == |
qinteract is also known as the ‘interactive node,’ because it allows you to interact directly with your data on Munin (or whatever server). | qinteract is also known as the ‘interactive node,’ because it allows you to interact directly with your data on Munin (or whatever server). | ||
* List of packages: http:// | * List of packages: http:// | ||
- | * Getting on: log onto Hugin, in the command line (username@hugin: ___) type “qinteract” if prompted, type yes, and then enter your cluster password. | + | * Getting on: log onto the cluster, in the command line (username@cluster: ___) type “qinteract” if prompted, type yes, and then enter your cluster password. |
* Congratulations! | * Congratulations! | ||
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== EXTRA TIPS == | == EXTRA TIPS == | ||
- | | + | * If you command line is gone in the cluster, as in you don’t have the prompt to type something, make sure nothing is open in gedit (for example batchMakeFSL_Data is open using gedit – click out), click ctrl+c |
- | | + | |
* In order to avoid this, follow commands with an & | * In order to avoid this, follow commands with an & | ||
* Hit the up arrow in order to go to the previous written command | * Hit the up arrow in order to go to the previous written command | ||
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===== Administration guides ===== | ===== Administration guides ===== | ||
- | * [[biac: | ||
* < | * < | ||
* [[biac: | * [[biac: |
biac/cluster.txt · Last modified: 2024/06/21 15:54 by cmp12