fScan Reference Manual, Chapter 1 (Topics): Introduction
Before attempting to analyze your own data you should look at a simple sample data set to get a feel for fScan's commands and interactive options.
Using fScan will generally involve Functional, Anatomical, and Behavioral data files. Any number of different types of files can be linked and processed together in a single data Workspace. A complete description of a data Workspace can be stored in an XML workspace descriptor file (WDF). When running fScan you can have it load your various data files separately, or they can all be loaded together simply by accessing the workspace WDF file.