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--- jvs:fscan:manual:chapter1:step_4 [2011/09/13 18:50]
voyvodic
+++ jvs:fscan:manual:chapter1:step_4 [2023/02/23 18:43] (current)
@@ Line 1: / Line 1: @@
+**fScan Reference Manual, Chapter 1 (Topics): Tutorial**
 ==== Step 4: Align ====
-For more information, see [[Overlay and Alignment]].
+For more information, see [[jvs:fscan:manual:chapter1:overlay_and_alignment|Overlay and Alignment]].
  **4.1** Once the overlay has been set, click on the align icon in the **Overlay** taskbar. This will open the **Alignment** taskbar.
@@ Line 13: / Line 14: @@
  **4.5** Select the "Rotate" icon. Make adjustments accordingly with arrow keys.
-***Note**:Alignment can be made with the "Rotate" and "Move" icons to correct any movement that may have occured in scanning, but the "Scale" tool should not prove necessary as the same subject, Sam, was scanned for functional and anatomical images and probably didn't grow or shrink too much in the process.
+***Note**: Alignment can be made with the "Rotate" and "Move" icons to correct any movement that may have occured in scanning, but the "Scale" tool should not prove necessary as the same subject, Sam, was scanned for functional and anatomical images and probably didn't grow or shrink too much in the process.
  **4.6** Once aligment is finished, select the "remove alignment and save changes" icon in the **Align** taskbar.
@@ Line 29: / Line 30: @@
  **4.12** To open this in fScan from your directory, simply type in: //fscan Aligned.wdf -D//
-Go back to [[Step 3]]\\ Continue to [[Step 5]]
+[[jvs:fscan:manual:chapter1:step_3|Previous]], [[jvs:fscan:manual:chapter1:step_5|Next]]
 **See Also:**\\

Brain Imaging & Analysis Center

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