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biac:analysis:topup_correction
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| Both sides previous revision Previous revision Next revision | Previous revision Next revision Both sides next revision | ||
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biac:analysis:topup_correction [2019/09/04 20:25] cmp12 |
biac:analysis:topup_correction [2021/08/24 16:04] cmp12 |
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| < | < | ||
| - | dwipre | + | dwifslpreproc |
| - | proc dwi.mif dwi_corr.mif -rpe_pair -se_epi bud.nii.gz -pe_dir AP -readout_time 0.10656 | + | |
| -rpe_pair specifies you're providing a pair of B0s ( regular, reversed ) | -rpe_pair specifies you're providing a pair of B0s ( regular, reversed ) | ||
| Line 298: | Line 297: | ||
| dwipreproc dwi.mif dwi_corr.mif -rpe_all -pe_dir AP -readout_time 0.10656 -debug | dwipreproc dwi.mif dwi_corr.mif -rpe_all -pe_dir AP -readout_time 0.10656 -debug | ||
| - | -rpe_all signals that you've replicated | + | - rpe_all signals that you've replicated |
| - | A | + | - pe_dir is the phase encode direction of your regular acquisition |
| - | LL the directions with a rpe acquisition | + | - readout_time from above |
| - | -pe_dir is the phase encode direction of your regular acquisition | + | |
| - | -readout_time from above | + | |
| </ | </ | ||
biac/analysis/topup_correction.txt · Last modified: 2023/02/23 18:43 (external edit)
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