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jvs:fscan:manual:chapter2:roi [2017/10/09 18:39] voyvodic |
jvs:fscan:manual:chapter2:roi [2023/02/23 18:43] (current) |
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* -roi CORREL flag refROI binsize corrROI name thresh | * -roi CORREL flag refROI binsize corrROI name thresh | ||
+ | |||
[[jvs: | [[jvs: | ||
* -roi CLUSTER refimage flag name | * -roi CLUSTER refimage flag name | ||
* -roi MERGE refimage flag name minvalley minsize mindist | * -roi MERGE refimage flag name minvalley minsize mindist | ||
+ | |||
[[jvs: | [[jvs: | ||
* -roi STATS refimage flag showflag mode name value nlevels level0 dlevel | * -roi STATS refimage flag showflag mode name value nlevels level0 dlevel | ||
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NAME - save stats in file NAME, if specified | NAME - save stats in file NAME, if specified | ||
VAL: if > 0, only calculate for this mask value | VAL: if > 0, only calculate for this mask value | ||
+ | | ||
If FLAG & 02010, time-series by CYCLE, | If FLAG & 02010, time-series by CYCLE, | ||
CYCLELENG: task cycle length in secs | CYCLELENG: task cycle length in secs | ||
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LEVEL0: first threshold level (def=0) | LEVEL0: first threshold level (def=0) | ||
DLEVEL: increment between levels (def=1) | DLEVEL: increment between levels (def=1) | ||
- | If input is a Surface: | + | |
+ | | ||
FLAG | FLAG | ||
1 - surface area of AREA ROI or path length of contour ROI | 1 - surface area of AREA ROI or path length of contour ROI |