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jvs:fscan [2011/04/04 15:43]
voyvodic 		jvs:fscan [2023/02/23 18:43] (current)
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 ====== fScan ====== ====== fScan ======
-fScan is a C program developed primarily for on-line processing of fMRI scans. + 
 +[[jvs:fscan:overview|fScanOverview]]\\ 
 +[[jvs:fscan:manual|fScan Reference Manual -- Contents]] 
 + 
 + 
 +fScan is a C program developed primarily for processing and visualization of fMRI scans. It has both a graphical user interface (GUI) for interactive processing and visualization as well as a command-line interface for scripting and batch processing.
  
 Features include: Features include:
   * fast, flexible access to image data (in a wide variety of file formats)   * fast, flexible access to image data (in a wide variety of file formats)
-  * image and/or temporal filtering operations (e.g. reformatting, noise filtering, motion correction, etc.)+  * sophisticated visualization and image manipulation tools 
 +  * 3-D workspace organization for keeping track of multiple resolution/orientation images of the same subject 
 +  * support for 2 workspaces simultaneously to compare different sessions, or subject and atlas 
 +  * native versions available for Linux or Windows, as well as X-windows support for Apple Macs  
 +  * interoperability with other image analysis software 
 +  * image and/or temporal filtering operations (e.g. reformatting, noise filtering, etc.)
   * statistical image processing operations (e.g. activation maps, region-of-interest statistics, etc.)   * statistical image processing operations (e.g. activation maps, region-of-interest statistics, etc.)
-  * automated tissue segmentation and 3-D surface reconstructions of the brain or other structures (Voyvodic et al., 2004).+  * automated tissue segmentation and 3-D surface reconstructions (Voyvodic et al., 2004).
   * real-time fMRI analysis capabilities   * real-time fMRI analysis capabilities
 +  * on-line documentation and simple installation/updating tools
  
 fScan was written by Jim Voyvodic. Version 1 was created at the Univerity of Pittsburgh.\\ fScan was written by Jim Voyvodic. Version 1 was created at the Univerity of Pittsburgh.\\
 Version 2 (the current version) is a completely rewritten implementation developed at Duke University.  Version 2 (the current version) is a completely rewritten implementation developed at Duke University. 
  
-An overview description of fScan is available at: [[jvs:fscan:overview|Overview]]+A beginners guide and sample data tutorial is available at: [[jvs:fscan:manual:chapter1:introduction|Introduction]] 
 + 
 +An overview description of fScan is available at: [[jvs:fscan:overview|fScanOverview]] 
 + 
 +There is a Web version of fScan with interactive tutorials at:\\ 
 +[[http://hawking.biac.duke.edu/webfscan|WebfScan]]
  
 For current fScan documentation, consult the:\\ For current fScan documentation, consult the:\\
jvs/fscan.1301931796.txt.gz · Last modified: 2014/08/04 16:03 (external edit)

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