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jvs:fscan:manual:chapter1 [2011/08/02 16:32]
voyvodic |
jvs:fscan:manual:chapter1 [2023/02/23 18:43]
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| **fScan Reference Manual, Chapter 1 (Topics): Contents ** | |
| ===== Introductory Topics -- Summary List ===== | |
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| |[[jvs:fscan:manual:chapter1:tutorial|Tutorial]]|Beginner's tutorial| | |
| |[[jvs:fscan:manual:chapter1:menus|Menus]]|Using taskbars and dialogs| | |
| |[[jvs:fscan:manual:chapter1:rois|ROIs]]|Using regions-of-interest| | |
| |[[jvs:fscan:manual:chapter1:timing|Timing]]|Handling reference timing data| | |
| |[[jvs:fscan:manual:chapter1:blocks|Blocks]]|Block-design analysis| | |
| |[[jvs:fscan:manual:chapter1:events|Events]]|Event-related analysis| | |
| |[[jvs:fscan:manual:chapter1:programming|Programming]]|Scripting fScan commands| | |
| |[[jvs:fscan:manual:chapter1:launching|Launching]]|Launching other programs from fScan| | |
| |[[jvs:fscan:manual:chapter1:colormaps|ColorMaps]]|Using color tables| | |
| |[[jvs:fscan:manual:chapter1:atlases|Atlases]]|Using atlases| | |
| |[[jvs:fscan:manual:chapter1:glossaries|Glossaries]]|Using glossaries| | |
| |[[jvs:fscan:manual:chapter1:lists|Lists]]|Using data lists| | |
| |[[jvs:fscan:manual:chapter1:images|Images]]|Using image data| | |
| |[[jvs:fscan:manual:chapter1:fMRI|fMRI]]|Processing 4-D image series| | |
| |[[jvs:fscan:manual:chapter1:surfaces|Surfaces]]|Using 3D surface-reconstructed data| | |
| |[[jvs:fscan:manual:chapter1:masking|Masking]]|Using image masks| | |
| |[[jvs:fscan:manual:chapter1:thresholding|Thresholding]]|Using intensity thresholding| | |
| |[[jvs:fscan:manual:chapter1:history|History]]|Data provenance records| | |
| |[[jvs:fscan:manual:chapter1:database|Database]]|Accessing database information| | |
| |[[jvs:fscan:manual:chapter1:cmdline|CmdLine]]|Starting fScan using a command line| | |
| |[[jvs:fscan:manual:chapter1:starting|StartUp]]|Start-up processing steps| | |
| |[[jvs:fscan:manual:chapter2|CmdSummary]]|List of commands| | |
| |[[jvs:fscan:manual:chapter1:cmdsummary|oldCmdSummary]]|List of commands| | |
| |[[jvs:fscan:manual:chapter1:infiles|InFiles]]|Input file formats recognized| | |
| |[[jvs:fscan:manual:chapter1:outfiles|Outfiles]]|Saving data| | |
| |[[jvs:fscan:manual:chapter1:workspace|Workspaces]]|Using workspaces| | |
| |[[jvs:fscan:manual:chapter1:ample|AMPLE]]|Amplitude mapping as percentage of local excitation| | |
| |[[jvs:fscan:manual:chapter1:cortmap|Cortmap]]|Patient mapping protocol| | |
| |[[jvs:fscan:manual:chapter1:aligning|Aligning]]|Aligning image data sets| | |
| |[[jvs:fscan:manual:chapter1:processing|Processing]]| | | |
| |[[jvs:fscan:manual:chapter1:variables|Variables]]|Using fScan internal variables| | |
| |[[jvs:fscan:manual:chapter1:stringsubst|StringSubst]]|String substitutions in interactive commands| | |
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| **See Also:**\\ | |
| [[jvs:fscan|fScan Home]], | |
| [[jvs:fscan:manual|fScan Manual]], | |
| [[jvs:fscan:manual:help|Manual Help]] | |
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