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jvs:fscan:manual:chapter2:reslice [2022/11/16 22:12] voyvodic [Reslice -- Process each slice independently] |
jvs:fscan:manual:chapter2:reslice [2023/02/23 18:43] |
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- | **fScan Reference Manual, Chapter 2 (CmdLineOptions): | ||
- | ===== Reslice -- Process each slice independently===== | ||
- | **usage: | ||
- | -reslice [reference] reslice_file newname sliceflag\\ | ||
- | -reslice overlay newname sliceflag\\ | ||
- | -reslice transform newname sliceflag\\ | ||
- | -reslice nvoxels nx ny nz [nt] newname sliceflag\\ | ||
- | -reslice voxsize xres yres zres [tres] newname sliceflag\\ | ||
- | -reslice vsort sortref newname\\ | ||
- | -reslice zsort sortref newname\\ | ||
- | ===== ===== | ||
- | RESLICE generates a new data set by resampling the current data set. If you specify a reference data set, as RESLICE_FILE, | ||
- | * reference - (default) the INFILE images will be resliced in the same orientation as the RESLICE_FILE, | ||
- | * overlay - \\ | ||
- | * transform - \\ | ||
- | * vsort - rearrange volume order. SORTREF can be " | ||
- | * zsort - rearrange slice order. SORTREF can be " | ||
- | |||
- | SLICEFLAG: | ||
- | * 1 - Interpolate pixel values (default) | ||
- | * 2 - Do not interpolate pixel values (default is usually interpolation) | ||
- | * 4 - reslice input to all timepoints in RESLICE_FILE; | ||
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- | **See Also:**\\ | ||
- | [[jvs: | ||
- | [[jvs: | ||
- | [[jvs: | ||
- | [[jvs: |