fScan Reference Manual, Chapter 1 (Topics): Contents
Introduction | Beginner's guide to fScan |
Tutorial | A tutorial guide to fScan |
Menus | Using taskbars and dialogs |
ROIs | Using regions-of-interest |
Timing | Handling reference timing data |
Blocks | Block-design analysis |
Events | Event-related analysis |
Programming | Scripting fScan commands |
Launching | Launching other programs from fScan |
ColorMaps | Using color tables |
Clipboard | Using the Copy/Paste clipboard |
Atlases | Using atlases |
Glossaries | Using glossaries |
Lists | Using data lists |
Images | Using image data |
fMRI | Processing 4-D image series |
Surfaces | Using 3D surface-reconstructed data |
Masking | Using image masks |
Thresholding | Using intensity thresholding |
History | Data provenance records |
Database | Accessing database information |
CmdLine | Starting fScan using a command line |
StartUp | Start-up processing steps |
CmdSummary | List of commands |
oldCmdSummary | Old list of commands |
InFiles | Input file formats recognized |
Outfiles | Saving data |
Workspace File | Using workspaces |
AMPLE | Amplitude mapping as percentage of local excitation |
Cortmap | Patient mapping protocol |
Aligning | Aligning image data sets |
Processing | |
Variables | Using fScan internal variables |
StringSubst | String substitutions in interactive commands |
RelatedPrograms | Handy shell scripts and other programs |
DBAX | Interacting with the DBAX imaging database web-service |
Head motion | Comments on head motion |
See Also:
fScan Home,
fScan Manual,
Manual Help